Completed/cancelled items are now filtered from format_for_injection() output. Update the existing test to verify active items appear and completed items are excluded.
Reorganize flat tests/ directory to mirror source code structure (tools/, gateway/, hermes_cli/, integration/). Add 11 new test files covering previously untested modules: registry, patch_parser, fuzzy_match, todo_tool, approval, file_tools, gateway session/config/ delivery, and hermes_cli config/models. Total: 147 unit tests passing, 9 integration tests gated behind pytest marker.
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